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Capturing an Image
Live » Capturing Images » Capturing an Image
To capture an image, first connect a camera as described in “. Then, push the Capture button (3). The captured image becomes displayed in the left, Captured Image, panel. The capture time and calibration (if one exists) are determined at the time of capture…
Image Processor
Getting Started » Tutorials » Image Processor
Detecting Creating a Recipe Describes the process of creating a segmentation recipe to identify features of interest in an image. Optimizing Steps Shows the procedures and applications for optimizing, or objectively determining, image processing…
Image Processor
Image Processor
The Image Processor is the most commonly used app. It is used for building and editing Recipes, as well as applying Recipes to single images. Recipes are sequences of image processing steps, in the right order and with the right settings, which work to identify…
Crop Image
Image Processor » Functions » Edit » Crop Image
Edit > Crop Image Crops the image to a sub-area of the previous image. Dimensions are listed as X: upper left corner, Y: upper left corner, with of crop box, height of crop box. Draw 1. Adjust crop area Click and drag the blue box to adjust the crop area.…
Resize Image
Image Processor » Functions » Edit » Resize Image
Edit > Resize Image Resizes the image to the new dimensions, or by a size factor. 1. Dimensions Resize image to new dimensions X: Enter new X-dimension. Leave blank (if Y is not) to maintain aspect ratio. Y: Enter new Y-dimension. Leave blank (if X is…
Rotate Image
Image Processor » Functions » Edit » Rotate Image
Edit > Rotate Image Rotates the image by the specified number of degrees. Positive rotation is counterclockwise and negative is clockwise. Rotated image is clipped to maintain image frame dimensions. Pixels that end up outside the image’s new location are set…
Flip Image
Image Processor » Functions » Edit » Flip Image
Edit > Flip Image Over Horizontal Flips the image over the horizontal axis. Over Vertical Flips the image over the vertical axis.
Translate Image
Image Processor » Functions » Edit » Translate Image
Edit > Translate Image Translates the image by a specified X and Y pixel distance. Pixels that end up outside the image’s new location are set to 0, resulting in black regions in a grayscale image and selected regions in a binary image. 1. X-Shift Pixels…
*Register Image
Image Processor » Functions » Edit » *Register Image
Edit > *Register Image *Register Image Requires Companion Image Aligns the Current Image to the Companion Image using either a translation, rigid, similarity, affine, or free-form registration. 1. Registration Type Free-Form: Allows full non-rigid image…
Open Image
Image Processor » Functions » File » Open Image
File > Open Opens an image. All common image formats and Bio-Formats are supported. Supported Formats TIF JPG BMP PNG GIF Bio-Formats (over 140 formats) Requires downloading the Bio-Formats package and placing inside the “plugins” folder in…
Image Histogram
Image Processor » Functions » View » Image Histogram
View > Image Histogram Histogram of the current image. For binary selections, selected = 0 and unselected = 1.
Image Dimensions
Image Processor » Functions » Measurements » Image Dimensions
Measurements > Image Dimensions Measures the X and Y dimensions of the Current Image. May be performed on grayscale Current Images.
Print Current Image
Image Processor » Functions » File » Print Current Image
File > Print Current Image Sends Current Image to the selected printer. The image will be printed as it is shown in the Current Image viewer.
Sparsely Sample Image
Image Processor » Functions » Edit » Sparsely Sample Image
Edit > Sparsely Sample Image Retains a fraction of the original pixels. Can be done randomly with a specified retained percentage or in a regular grid with specified pixel spacing. 1. Method Random: Use random sampling to produce sparse image Grid:…
Open Recent Image
Image Processor » Functions » File » Open Recent Image
File > Open Recent Image Holds the last five images opened, for easy access. Clear Recent clears this list.
Save Reference Image
Image Processor » Functions » File » Save Reference Image
File > Save Reference Image Saves the References Image as an 8-bit (if grayscale) or true-color (if color) TIF-file. The image will be saved as it is shown in the Reference Image viewer.
Save Current Image
Image Processor » Functions » File » Save Current Image
File > Save Current Image Saves the Current Image as an 8-bit TIF-file. The image will be saved as it is shown in the Current Image viewer.
Load Reference Image
Image Processor » Functions » File » Load Reference Image
File > Load Reference Image Loads an image as the reference image. All common image formats are supported. Grayscale images will be read-in as 8-bit. Color images will offer a prompt which allows the user to decide how to convert the color image to 8-bit…
Load Companion Image
Image Processor » Functions » Memory » Load Companion Image
Memory > Load Companion Image Loads in an image from a file as the Companion Image and as the Current Image. If the chosen image’s directory will hold a set of images to be paired with starting images in a batch process, then select check the “Load for…
Call Original Image
Image Processor » Functions » Memory » Call Original Image
Memory > Call Original Image Calls the Original Image to be the Current Image.
Set Companion Image
Image Processor » Functions » Memory » Set Companion Image
Memory > Set Companion Image Stores the Current Image in memory as the Companion Image. This is the most important memory slot as it is used for various arithmetic, masking, and measurement operations between it and the Current Image. The companion image will…
Call Companion Image
Image Processor » Functions » Memory » Call Companion Image
Memory > Call Companion Image Call the Companion Image to be the Current Image.
Tracing in Image Processor
Session Processor / AI Session Processor » AI (formerly Deep Learning Trainer) » Tracing » Tracing in Image Processor
This example shows a Recipe-assisted approach to tracing features in the Image Processor. This approach is most useful for tracing grain boundaries, or other similar features. Load Image and Recipe ⇩ Download “trace-grains” recipe. This can be used as a…
Image Size and Calibration
Live » Controlling Camera Settings » Image Size and Calibration
Image size controls are located in the top of the Camera Controls panel, just below the Camera Select dropdown. Image size The image size dropdown (1) allows the user to select between different available sizes, determined by what the camera makes available. …
Saving a Captured Image
Live » Capturing Images » Saving a Captured Image
To save an image once it has been captured, use either the Save Image button or the Save Captured Image menu item. When an image is saved, the time of capture, camera vendor and model, and calibration (if it exists) are saved into the file’s metadata if the…
Set as Reference Image
Image Processor » Functions » Edit » Set as Reference Image
Edit > Set as Reference Image Set the Current Image as the Reference Image. Future B/W Current Images will then be overlaid, outlined, or labeled on this new Reference Image.
Set Memory Image #1-6
Image Processor » Functions » Memory » Set Memory Image #1-6
Memory > Set Memory Image #1-6 Stores the Current Image in memory as Memory Image #1-6. You can store up to six different images. These images can be recalled later as well as used in some masking operations.
Call Memory Image #1-6
Image Processor » Functions » Memory » Call Memory Image #1-6
Memory > Call Memory Image #1-6 Calls Memory Image to be the Current Image. You can call up to six different images to be the Current Image.
Developing an Analysis Workflow
Checkpoint (beta) » Developing an Analysis Workflow
Required materials MIPAR Base + Report Generator Images to analyze Building the recipe 1. Using the standard images and the MIPAR Image Processor, develop a recipe to perform the desired analysis 2. Record any Preferences that may impact analysis: Measurement…
Layout
3D Toolbox » Layout
Below are labeled screenshots of the 3D Toolbox which reveals the layouts of and purpose behind each user interface element. Layout #1: Recon (recommended when working with a reconstruction) Shows the Reconstruction side only. Used when working with a…
v3.0.5 Release Notes
Release Notes » v3.0.5 Release Notes
Bug Fixes Addressed bug where resizing Manual Edit windows can cause editing tools to crash Fixed bug where Manual Edit would crash when “interruptible” while running a batch which contained a Crop Image step Fixed bug where white background would…
Keyboard Shortcuts
Getting Started » Keyboard Shortcuts
*On Mac systems, use CMD instead of CTRL. All Windows Zoom CTRL+D or Scroll Wheel Pan CTRL+F or Scroll Click and Drag Toggle Zoom/Pan CTRL Measure (if appl.) CTRL+M Recipe Step Preview…
v4.1.0 Release Notes
Release Notes » v4.1.0 Release Notes
New Features Load Multiple Images into Image Processor Image Processor can now open multiple images to combine into channels. Use File > Open Images to Channels. Batch Process Multichannel Data Using Alternative Data Structure Batch Processor can now…
Capturing Images
Live » Capturing Images
(1) Connecting the camera: Images can be captured from a camera after it has been connected with the camera dropdown. (2) Previewing the camera: Optionally before you capture an image, you can preview a live feed of the camera’s field-of-view with the Preview…
Apply Stored FFT Filter
Image Processor » Functions » Pre-Processing » Frequency » Apply Stored FFT Filter
Pre-Processing > Frequency > Apply Stored FFT Filter Applies the Companion Image as an FFT filter to the Current Image. Dark or black pixels in the filter will remove those portions of the image’s FFT. Current Image should be the image to be filtered, and…
The Recipe
Image Processor » The Recipe
MIPAR’s unique technology is the Recipe. Like an engine of a car, you use the one that’s right for the job. Make them yourself, start with one from the 80+ built-in templates, or get one custom-designed for you. Recipes are built in the Image Processor,…
v4.2.1 Release Notes
Release Notes » v4.2.1 Release Notes
Improvements Flatten background can now accept an empty value. Bug Fixes Improved MIPAR error handling when loading a broken recipe. Improved Report Generator handling of vector elements in the current panel. Scale factor stays accurate after the last…
Applying Recipes
Live » Applying Recipes
To apply a recipe to a captured image, the recipe can be preloaded in Live Mode, using the Load Recipe button (1) or menu option. This causes the recipe to be placed in the Preloaded Recipe dropdown (2): This pre-loading can be performed either before or after…
Layout
Report Generator » Layout
Report Types Available report types are as follows: Report Type Generated From Single Image Global Measurements table in Image Processor Single Image Feature Color by Measurements Single Image Local Local…
v3.3.0 Release Notes
Release Notes » v3.3.0 Release Notes
New Features Express Licenses Express Licenses are now available. These “runner licenses” are available at reduced rates and only allow recipe running (not building). Express Licenses provide all other Base License functionality. They are an…
v3.4.0 Release Notes
Release Notes » v3.4.0 Release Notes
New Features Local Measurements in Recipe Add local measurements as a step in the recipe! They can be displayed with a simple click after recipe loading and summary stats (e.g., mean, min, max, etc.) of the local measurement will appear in the global…
Calibrating The Scale
Image Processor » Calibrating The Scale
Embedded Image Scale Factors MIPAR can read embedded scale factors from over 150 file formats once the Bio-Formats plugin is in place. See the Supported Formats page for more information on setting up this plugin. If an image is opened which contains an embedded…
Find Lines
Image Processor » Functions » Segmentation » Find Lines
Segmentation > Find Lines Finds lines in the Current Image using an algorithm based on searching within the image’s Hough transform. 1. Minimum Length Rejects lines under a certain length. 2. Infinite Lines Allows the detection of lines that proceed to…
Calibrating Captured Pixel Size
Live » Calibrating Captured Pixel Size
To specify the calibration of an image, you may either manually enter values for pixel size and objective when you load the camera, or you may use objective presets.
v3.0.4 Release Notes
Release Notes » v3.0.4 Release Notes
Bug Fixes Fixed bug where MIPAR loads a color image as grayscale due to small thumbnail in second TIF page Fixed bug where error tone is given when entering a factor in Resize Image Fixed bug where table from “Ruler Tool” is not shown properly in…
v4.2.0 Release Notes
Release Notes » v4.2.0 Release Notes
New Features Recipe Templates MIPAR now ships with a fully interactive environment to browse and try over 80 pre-built recipe templates. Sort by category, search, and even watch videos on the available templates. Each recipe also offers an example image to…
Recipe Templates
Image Processor » Recipe Templates
MIPAR v4.2.0 brought pre-built recipes right into the Image Processor. Over 80 recipes are available to browse and try on either the included example images, or your own. They are called templates as they are intended to be strong starting points for many solutions.…
Starting MIPAR Live
Live » Starting MIPAR Live
MIPAR Live resides inside the Image Processor and is started simply by starting the Image Processor from the Launch Bar (1). When you have an active MIPAR Live license, the Image Processor opens in Live mode. To switch between Live and Recipe modes, use the Live /…
v4.1.1 Release Notes
Release Notes » v4.1.1 Release Notes
Bug Fixes Viewing mode stays in “Layers” after switching from Simple to Detail after loading recipe in Image Processor. Average neighbor distance is now properly reported for only 2 features. Fixed bug when loading out-of-date recipes that apply…
Highlight Lines
Image Processor » Functions » Pre-Processing » Highlight Lines
Pre-Processing > Highlight Lines Uses the Frangi filter [1] to highlight linear-type features in the image. Combine with a threshold afterwards to select certain linear-type features. 1. Type Dark: Highlight dark linear-type features Bright: Highlight…
Introduction
Getting Started » Introduction
MIPAR is a revolutionary image analysis software, capable of identifying and measuring features from nearly any image one can capture. Our users have shown it to be perhaps the most the efficient and flexible image processing software on the planet. Through five…
Previewing the Camera
Live » Capturing Images » Previewing the Camera
To live preview the selected camera’s current field-of-view, use the Preview button (1). The preview feed will appear in the right Live Image panel. This feed will reflect, in real time, changes in the camera settings and in the sample. Note that previewing…
Custom Measurements
Image Processor » Functions » Measurements » Custom Measurements
Custom Measurements Custom Measurements can be generated as an image measurement or a feature measurement. Image measurements result in a single value per image, feature measurements result in per feature measurements. Custom measurements allow for user defined…
Manual Edit
Image Processor » Functions » Segmentation » Manual Edit
Segmentation > Manual Edit Opens the Current Image in an editor which allows for manual edits to its segmentation. Here you can add missed features and remove artifacts. Also useful for manually defining a region of interest (ROI), which when set in a memory image,…
v4.1.2 Release Notes
Release Notes » v4.1.2 Release Notes
Bug Fixes Fixed error when optimizing a step compared to the companion image. V2C files could display as failed despite activating successfully. Preferences window would fail to close under some conditions. Undo no longer resets a layer color change if an…
v4.3.1 Release Notes
Release Notes » v4.3.1 Release Notes
Improvements Added the ability to save the current view from the Image Processor into a recipe, so that the view is restored when the recipe is restored. Remembered settings include Simple Mode, showing or hiding measurements, overlay vs. outline and their…
Real-Time Processor
Real-Time Processor
The Real-Time Processor is similar to the Batch Processor, but used for applying a Recipe to multiple images, every time a new image is added to a folder being “watched”. Any global or feature measurements added to the recipe will be output into the save…
Measurements
Image Processor » Measurements
Measure Image Global measurements report one measurement per image. Common measurements include area fraction of features, total perimeter of features, and number of features. Click any link below for descriptions of the many global measurements available in…
Perimeter Pixels
Image Processor » Functions » Morphology » Perimeter Pixels
Morphology > Perimeter Pixels Sets pixels which are on the perimeter of features as empty, while all other pixels in an image are selected. To select only the perimeter of your features, follow this step with an Invert.
Find Circles
Image Processor » Functions » Segmentation » Find Circles
Segmentation > Find Circles Finds circles in the Current Image using an algorithm based on searching within the image’s Hough transform. This function can take some time to complete depending on the size of and number of circles in the image. 1. Method Sets…
Save All Images
Image Processor » Functions » File » Save All Images
File > Save All Images Saves an image from each Recipe step based on the current viewing mode.
Introduction
REST API » Introduction
MIPAR REST API is a powerful tool that packages the MIPAR engine into a Docker Image Scope The MIPAR REST API was developed to meet the needs of customers who are already using MIPAR to do powerful image analysis, but would like to setup “headless”…
v4.5.0 Release Notes
Release Notes » v4.5.0 Release Notes
New Features Spotlight Extension We are excited to introduce MIPAR Spotlight. Integrated into the Image Processor, Spotlight enables the next generation of feature detection. Spotlight behaves like any other detection Recipe step, so MIPAR Clean-up,…
Live
Live
MIPAR Live is an extension that allows MIPAR to connect directly to a supported camera and capture images to analyze. It provides a direct path from image capture to analysis, without having to switch software or load image files into MIPAR. Topics Supported…
v3.0.1 Release Notes
Release Notes » v3.0.1 Release Notes
Bug Fixes Deep Learning Training Fixed an issue where some deep learning models would not train based on their layer names. Fixed an issue where some deep learning models would not train from a Session output from a batch process. Portable Session Saving …
Applying
Session Processor / AI Session Processor » AI (formerly Deep Learning Trainer) » Applying
Once a deep learning model is trained, it can be applied to a new image to automate feature detection. Effectively, application of a deep learning model results in a pre-processed version of the original image, where features of interest are “lit-up”…
v3.0.3 Release Notes
Release Notes » v3.0.3 Release Notes
Bug Fixes Manual Edit Fixed an issue where Manual Edit step failed to open during edit if “Labels” was the default viewing mode. Recipe Saving Fixed an issue where if you had a Recipe with only measurement steps you would not one prompted to…
Similarity
Image Processor » Functions » Pre-Processing » Similarity
Contains filters that detect similarity and symmetry within an image or between two images. Pattern Mapping Orthogonal Correlate Symmetry Mapping *Cross-Correlate
Recipe Store
Getting Started » Recipe Store
Enter Recipe Store ›› What Is It? The Recipe Store is a fantastic resource for getting the most out of MIPAR. Find and download Recipes for all sorts of segmentation problems. You’ll learn fast and accelerate your work. How Does It Work? Browse the…
Tracing
Session Processor / AI Session Processor » AI (formerly Deep Learning Trainer) » Tracing
There are several approaches to tracing features to setup a deep learning training. Below are examples of three recommended approaches. Tracing can be done directly in the Deep Learning Trainer (fully manual, or semi-automated), in the Image Processor, or in an…
POST Method
REST API » POST Method
There are two commands that can be sent to the REST API using a POST call: process and activate Start the MIPAR REST API Docker image With docker hub running, execute the command docker run -it -p The can be set by the user, for example 8000:8000 and the is…
Channel Operation
Image Processor » Functions » Color » Channel Operation
Color > Channel Operation Performs an arithmetic operation on the channels of the opened image. Only applies to color images (i.e. images with multiple channels). Download a recipe of example channel operations for your color image. An example color image may be…
Feature Measurements
Image Processor » Functions » Measurements » Feature Measurements
Measurements > Feature Measurements Feature Measurements allows a variety of measurements to be made from each feature in the image or Layer. 1. Size Area: Area of each feature. Area Fraction: Area fraction occupied by each feature relative to entire…
Color by Measurements
Image Processor » Functions » Measurements » Color by Measurements
Measurements > Color By Measurements Colors the separate features in the Current Image according to a set of feature measurements. 1. Load If you have already generated measurements beforehand and then decide to produce a color-coded image, you can load the…
v3.2.0 Release Notes
Release Notes » v3.2.0 Release Notes
New Features Choose Format When Saving Multiple Images You can now choose between the following formats when using “Save All Images” from the Post Processor and Deep Learning Trainer: TIFF PNG JPEG BMP HDF4 Re-designed Pattern Mapping …
Sharpen
Image Processor » Functions » Pre-Processing » Sharpen
Pre-Processing > Sharpen Sharpens the Current Image by deconvolving an unsharpening kernel out of each pixel. 1. Alpha Parameter which controls sharpness. Higher values produce more sharpening. Tips Useful for restoring the contrast of fine features…
exeRecipe()
Python API » Library » exeRecipe()
The exeRecipe function is used to execute a given recipe on a given image and return the binary mask data and their corresponding measurements. *As of 3.4.0, exeRecipe() will no longer call startLicenseMan() before recipe execution, it must be called before exeRecipe.…
Tracing in External Application
Session Processor / AI Session Processor » AI (formerly Deep Learning Trainer) » Tracing » Tracing in External Application
There are several applications available for manual image tracing on desktop and mobile operating systems. Below are just a few of the options for Windows and Mac platforms: Windows Mac Adobe Photoshop x x Gimp x …
v3.4.3 Release Notes
Release Notes » v3.4.3 Release Notes
Bug Fixes Using Replace with Triangulation on a segmentation with one feature will no longer cause a recipe failure Generating a summary report out of the Post Processor will no longer produce an error Generating Rotating Intercepts measurement on an empty…
Spotlight Tool
Spotlight ✧˙₊ » Spotlight Tool
The Spotlight recipe step works like any other MIPAR recipe step. It’s applied on recipe load and interacts with the rest of the recipe like a detection step. Users have full access to the rest of the MIPAR toolkit which enables detection filtering, clean up and…
v4.4.0 Release Notes
Release Notes » v4.4.0 Release Notes
New Features Pause/Resume Batch Processing We are pleased to introduce a new Save/Resume feature to our Batch Processor and Real-Time Processor, which allows users to pause active batch or real-time processing, and resume at a later time. Previous sessions…
FFT Filter
Image Processor » Functions » Pre-Processing » Frequency » FFT Filter
Pre-Processing > Frequency > FFT Filter Modifies the Fourier transform of the Current Image with either custom or preset filters. Has many applications, ranging from background removal to edge-finding to artifact reduction. 1. Custom a. Selection…
GPU Computation
Getting Started » GPU Computation
Enable From any app, launch File > Preferences. In the GPU panel, set to “GPU Computation” to “On” if you have a supported GPU. Click here to learn more about the technical aspects and benefits of GPU computation. *GPU computation requires an…
Layers
Image Processor » Layers
Each Recipe step outputs either an grayscale, or B/W image. B/W images are often the goal, as the black pixels represent the selection at that point in the Recipe. If you are only targeting one set of features, a final B/W image is all you need. However, if you need to…
Local Measurements
Image Processor » Functions » Measurements » Local Measurements
Measurements > Local Measurements Generates and visualizes measurements from individual pixels in the image. 1. Measurement Select the following types of measurements you would like to see visualized in the image. Anisotropy: Measures the amount of local…
Intercepts
Image Processor » Functions » Measurements » Intercepts
Measurements > Intercepts Random Lines Measures metrics such as mean intercept by drawing a specified number of random or rotating lines through the features in the Current Image. 1. Number of Lines Number of lines to draw 2. Noise Removal Method for…
v4.3.0 Release Notes
Release Notes » v4.3.0 Release Notes
New Features Custom Measurements MIPAR now supports user defined measurements using formulas and mapping. Define new measurements using algebraic expressions, using existing measurements and other custom measurements as arguments. Map any measurement output to…
Getting Started
Getting Started
Welcome to the MIPAR User Manual! This manual is meant to complement the various tutorials and 1-on-1 training sessions available on the MIPAR website. It offers an overview of the each application, and provides a comprehensive description of the Image…
*Histogram Match
Image Processor » Functions » Pre-Processing » *Histogram Match
Pre-Processing > *Histogram Match Requires Companion Image Modifies the overall contrast of the Current Image to match as closely as possible to the overall contrast of the Companion Image. Often used when you have a series of images that you want to normalize the…
Non-Local Means
Image Processor » Functions » Pre-Processing » Non-Local Means
Pre-Processing > Non-Local Means Reduces image noise using an advanced filtering algorithm [1]. Each pixel’‘s local window is compared to windows around it. The windows’ center pixels are averaged together with weights depending on the variations…
Edit
Image Processor » Functions » Edit
Contains functions for editing image dimensions and manipulating image position and rotation. Functions Undo Burn Scale Bar Set as Reference Image Size Crop Image Resize Image Position Rotate Image Flip Image Translate Image *Register…
Memory
Image Processor » Functions » Memory
Contains functions for storing and recalling images from various image memory slots. Functions Companion Image Set Companion Image Load Companion Image Call Companion Image Memory Set Memory Image #1-6 Call Memory Image #1-6 Call Original Image Tutorial …
Pattern Mapping
Image Processor » Functions » Pre-Processing » Similarity » Pattern Mapping
Pre-Processing > Similarity > Pattern Mapping Processes and colors pixels based on their surrounding image pattern. Produces a grayscale map of the pattern indicator for further processing into an ultimate selection. Available tools for pattern analysis are local…
v3.0.0 Release Notes
Release Notes » v3.0.0 Release Notes
Major New Features Deep Learning The most significant new technology to come to MIPAR yet. Teach MIPAR to detect even the most complex features simply by tracing. Models are trained in the new Deep Learning Trainer. Trained models can be applied to images as…
Call Output
Image Processor » Functions » Deep Learning » Call Output
Deep Learning > Call Output Calls an output from a deep learning model applied earlier in the Recipe. This is useful for performing separate processing workflows on different probability maps from a single Apply Model step. 1. Output Choose image to display and…
*Intensity Mean
Image Processor » Functions » Measurements » *Intensity Mean
Measurements > *Intensity Mean Requires Companion Image Measures the average grayscale intensity within selection based on latest Companion Image MIPAR will generate the intensity measurement using the original image bit depth, see Companion Image for a list of…
*Intensity StdDev
Image Processor » Functions » Measurements » *Intensity StdDev
Measurements > *Intensity StdDev Requires Companion Image Measures the standard deviation of grayscale intensity within selection based on latest Companion Image MIPAR will generate the intensity measurement using the original image bit depth, see Companion Image…
*Intensity Sum
Image Processor » Functions » Measurements » *Intensity Sum
Measurements > *Intensity Sum Requires Companion Image Measures the total of grayscale intensity within selection based on latest Companion Image MIPAR will generate the intensity measurement using the original image bit depth, see Companion Image for a list of…
Optimization
Image Processor » Optimization
This interface allows you to setup and start recipe step (process) optimization (i.e., auto-setting determination). After selecting optimization parameters, you will be asked to enter a range for some of the process’ parameters. This will start a loop which will…
Auto-save
Live » Capturing Images » Auto-save
The auto-save option instructs MIPAR to save images as they are captured off the microscope. It is enabled through the Auto Save Captured checkbox (1). When auto-save is enabled for the first time, the Auto Save Settings window will appear. This window can also be…